正在加载完整 README。 以下为已保存的摘录。
himena-relion is a modern RELION GUI implemented as a himena plugin.
:warning: himena-relion is mainly tested with RELION 5.0.x and may not work with other
versions.
(Original dataset is from RELION SPA tutorial)
himena-relion is a plugin of himena. You will need to install both packages into the same Python environment, and mark himena-relion as a startup plugin of your himena profile. For more details, please refer to the installation guide.
View, queue and run RELION single-particle and tomography jobs
Outputs of most of the job types can be directly visualized in the GUI.查看完整 README ↗himena-relion is a modern RELION GUI implemented as a himena plugin.
:warning: himena-relion is mainly tested with RELION 5.0.x and may not work with other
versions.
(Original dataset is from RELION SPA tutorial)
pip install himena-relion[recommended]
himena-relion is a plugin of himena. You will need to install both packages into the same Python environment, and mark himena-relion as a startup plugin of your himena profile. For more details, please refer to the installation guide.
Outputs of most of the job types can be directly visualized in the GUI.
himena-relion is not a web-based application — this has a huge advantage in the interactive rendering of large images that is essential especially for cryo-ET. Owing to the powerful vispy backend and EGL offscreen rendering, himena-relion can provide efficient 2D/3D rendering even over SSH.
You can interactively view your RELION job pipeline as a flowchart, open jobs and its input/output files.
You can safely create a RELION external job by subclassing RelionExternalJob.
himena-relion also provides useful external jobs missing in the RELION GUI, such as
"Erase Golds" and "Shift Map".