readfcs: Read FCS files

Lightweight Python library to load data and metadata from Flow Cytometry Standard (FCS) files into DataFrame and AnnData objects.

Install:

$ pip install readfcs

Get started:

import readfcs

readfcs.read()  # Read FCS files into `AnnData`

readfcs.ReadFCS()  # Debug possible integrity issues in your FCS files

Read the docs or read the blog post.