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The VCell is a comprehensive framework for modeling and simulating cell biology from biological pathways down to cell biophysics. VCell supports the biochemical network and rule-based modeling and electrophysiology in compartmental modeling and within cellular geometry.
Simulation capabilities include ODEs, Reaction-Diffusion equations within cellular geometry, Gillespie and Hybrid stochastic solvers, Particle-based spatial simulations, network free simulations, and cell kinematics (moving boundary problems).查看完整 README ↗目前无法加载完整 README。请通过原文链接阅读。 以下为已保存的摘录。
The VCell is a comprehensive framework for modeling and simulating cell biology from biological pathways down to cell biophysics. VCell supports the biochemical network and rule-based modeling and electrophysiology in compartmental modeling and within cellular geometry.
Simulation capabilities include ODEs, Reaction-Diffusion equations within cellular geometry, Gillespie and Hybrid stochastic solvers, Particle-based spatial simulations, network free simulations, and cell kinematics (moving boundary problems).查看完整 README ↗