oxo-flow

介紹

(Ready) Yet Another bioinformatics workflow engine https://traitome.github.io/oxo-flow/latest/

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README

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A Rust-native bioinformatics pipeline engine with AI Companion — built from first principles for performance, reproducibility, and developer experience. oxo-flow is a high-performance bioinformatics pipeline engine built in Rust. It compiles workflows into Directed Acyclic Graphs and orchestrates execution with native concurrency, per-rule environment isolation, and AI-powered assistance — all from a single binary. 🧬 Community: browse curated, rated, ready-to-run workflows — ports of popular nf-core & Snakemake pipelines, original designs, and community submissions — at oxo-flow-community.